Restructure the documentation hierarchy to prepare for documenting additional built-in modules. Move all core library documentation from `doc/site/core/` to `doc/site/modules/core/`, rename `modules.markdown` to `modularity.markdown`, remove `^category` metadata lines from all affected pages, update cross-reference links to use relative paths under the new structure, and add a TODO placeholder to the Class class page.
Add a custom Pygments lexer plug-in for Wren syntax highlighting, update contributing docs with setup instructions for the lexer, and switch every `:::dart` annotation across all doc/site markdown files to `:::wren` so code examples render with the correct language grammar.
- Delete wren_io.c, wren_io.h, and io.wren source files
- Remove multi-arity print overloads and IO.read/IO.time methods
- Add System class with print, printAll, write, writeAll methods to core.wren
- Update all documentation examples and README to use System.print instead of IO.print
Create new modules.markdown guide explaining Wren's module system, import syntax, and top-level scoping. Update error-handling.markdown to use "Top-level variable" instead of "Global variable" in error messages. Revise variables.markdown to clarify top-level variable visibility and link to the new modules page. Add "Modules" link to the site navigation template.
Add `^category` front matter to all language, types, and reference doc pages for site navigation restructuring. Replace `:::wren` and `:::java` code block annotations with `:::dart` across multiple files. Create new stub pages for core-libraries, embedding-api, and contributing under the reference category. Remove the old embedding and getting-involved stub pages.