Implement spawn_tracker module to enforce recursive agent spawning limits via R_MAX_SPAWN_DEPTH and R_MAX_TOTAL_SPAWNS environment variables, replacing the previous max_subagents parameter in tool_agent.c. Add tool_deepsearch.c implementing an iterative multi-query research algorithm with configurable system message, and register the new source files in Makefile build targets.
- Add agent_set_is_subagent and agent_set_tool_registry to agent API for subagent support
- Add timeout_seconds parameter to r_bash_execute to prevent hanging processes
- Refactor context_manager truncation logic with dynamic ratio-based truncation and total size calculation
- Add messages_to_json_string helper and r_config_get_max_tokens accessor
- Introduce tool_registry_get_specialized for type-filtered tool registries
- Add completion_phrases and passive_phrases detection to agent completion logic
- Suppress spinner in http_client when stderr is not a TTY
- Add comprehensive agent_benchmark.py with TestCase framework and logging
This commit deletes the complete implementation of the agent loop, authentication module, web browsing utilities, chat prompt builder, database helper, and HTTP client. All corresponding header files and test harnesses are also removed. The diff shows the deletion of 6 source files and 6 header files totaling over 1000 lines of code, including the agent state machine, API key resolution logic, curl-based HTTP functions, SQLite database initialization and CRUD operations, and the JSON chat prompt construction.
